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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1221350_1221525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1221350 - 1221525

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGAGC

5'SS Class:

major

3'SS Sequence:

CTTCTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGAAAT

U12 Branch Point Sequence:

GAGTGATCAACT

Flanking Amino Acid:

LHQPTRDREKEKRHQDRALA

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

69.7

40.9

Major BPS

59.4

0.23

1.2

65.3

38.6

Major PPT

84.1

0.77

0.7

79.5

26.1

Minor 5ss

32.7

-2

3.1

43.6

43.7

Minor BPS

45.7

-0.2

2.2

63.79

45.6

Associated Gene:

Gene:

CTR9

Ensembl Gene ID:

ENSAPLG00000005343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005581

1214007 - 1233162

19156