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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1221712_1221956_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1221712 - 1221956

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTAAC

5'SS Class:

strong_major

3'SS Sequence:

AGTTTTTATTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GAGTTTTTATTC

Flanking Amino Acid:

WFKEALQINQDHPDAWSLIG

Intron Amino Acid Position:

563

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.8

79.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.1

0.68

0.9

78.2

39.8

Minor 5ss

36.7

-1.5

2.6

44.4

43.7

Minor BPS

49.8

-0

1.5

55.2

37.6

Associated Gene:

Gene:

CTR9

Ensembl Gene ID:

ENSAPLG00000005343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005581

1214007 - 1233162

19156