Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_1223493_1223589_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1223493 - 1223589

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTAAAC

5'SS Class:

major

3'SS Sequence:

TCTCTTTGTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTCATCTACT

Flanking Amino Acid:

AQILEQTDIQGALSAYGTAT

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

69.7

34.5

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

71.8

0.49

1.1

73.8

34.7

Minor 5ss

39.9

-1.1

2.8

51.9

44.9

Minor BPS

51.2

0.12

2.2

77.93

43.9

Associated Gene:

Gene:

CTR9

Ensembl Gene ID:

ENSAPLG00000005343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005581

1214007 - 1233162

19156