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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1228221_1229527_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1228221 - 1229527

Intron Length:

1307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAT

U12 Branch Point Sequence:

AGATTGTGAATG

Flanking Amino Acid:

KALRTNPGCPAEVRLGMGHC

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

76.9

33.7

Major BPS

74.1

0.6

38.9

Major PPT

83.9

0.76

0.8

76.9

37.3

Minor 5ss

31.3

-2.1

38.6

46.4

Minor BPS

44.2

-0.5

2.1

47.9

39.4

Associated Gene:

Gene:

CTR9

Ensembl Gene ID:

ENSAPLG00000005343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005581

1214007 - 1233162

19156