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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12352594_12352707_R

Intron Information:

Intron Rank:

147332

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12352594 - 12352707

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AA

5'SS Sequence:

ACA|GTTAAATAT

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTTTTTTAA|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTGCCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.8

0.04

1.2

57.2

36.3

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

50.6

0.01

3.2

88.9

28.1

Minor 5ss

37.5

-1.4

3.2

54.3

43.7

Minor BPS

47.5

-0.2

3.4

76.51

34.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033974

12348944 - 12352716

3773