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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12366872_12368689_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12366872 - 12368689

Intron Length:

1818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTTATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGAAT

U12 Branch Point Sequence:

CTTTGCTTATTA

Flanking Amino Acid:

QDAWDYVQKQISCCGLNGAE

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.8

33.3

Major BPS

59.4

0.24

1.5

69.7

44.2

Major PPT

74.9

0.56

0.9

74.5

Minor 5ss

25.8

-2.8

2.9

29.5

43.2

Minor BPS

56.1

0.19

70.6

42.5

Associated Gene:

Gene:

CD82

Ensembl Gene ID:

ENSAPLG00000006580

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030851

12364271 - 12381848

17578

ENSAPLT00000006850

12365728 - 12395064

29337