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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12430129_12466942_F

Intron Information:

Intron Rank:

145314

Intron Class:

major

Intron Phase:

Intron Coordinates:

12430129 - 12466942

Intron Length:

36814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCCATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TTTTCTTCCATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

80.7

33.8

Major BPS

68.1

0.45

58.1

38.5

Major PPT

0.77

0.6

80.7

24.7

Minor 5ss

35.6

-1.6

2.6

35.6

40.5

Minor BPS

0.21

1.9

75.09

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040278

12429621 - 12489377

59757