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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12467063_12488182_F

Intron Information:

Intron Rank:

145315

Intron Class:

major

Intron Phase:

Intron Coordinates:

12467063 - 12488182

Intron Length:

21120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTCGTAA

5'SS Class:

major

3'SS Sequence:

TCTCTGGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAAAAT

U12 Branch Point Sequence:

CTTACATAAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.2

60.6

36.2

Major BPS

61.8

0.29

1.1

67.7

34.6

Major PPT

78.4

0.64

0.9

72.2

37.8

Minor 5ss

42.2

-0.9

3.1

54.8

49.4

Minor BPS

48.5

-0

2.1

71.28

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040278

12429621 - 12489377

59757