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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12530284_12531261_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12530284 - 12531261

Intron Length:

978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGGAGA

5'SS Class:

major

3'SS Sequence:

TTTTTGACCGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

65.7

41.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.4

1.1

Minor 5ss

25.7

-2.8

2.9

22.2

37.3

Minor BPS

79.8

1.01

88.33

30.2

Associated Gene:

Gene:

ALX4

Ensembl Gene ID:

ENSAPLG00000007118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038782

12529411 - 12556995

27585