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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12556624_12556760_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12556624 - 12556760

Intron Length:

137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

AAGCCCTGACGC

Flanking Amino Acid:

LLTRAENYAQIQNPSWIGNN

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

74.9

35.3

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

70.9

0.47

0.7

64.7

23.9

Minor 5ss

27.6

-2.6

32.2

42.5

Minor BPS

-0.5

1.9

48.42

40.9

Associated Gene:

Gene:

ALX4

Ensembl Gene ID:

ENSAPLG00000007118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007390

12531825 - 12557084

25260