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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12573616_12574188_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12573616 - 12574188

Intron Length:

573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTGTA

5'SS Class:

major

3'SS Sequence:

GTCTGTCATGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

CTGTATTTAAAA

Flanking Amino Acid:

VLTGAAFYHKYFNYLYTYKM

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

74.1

36.6

Major BPS

81.6

0.78

0.8

24.9

Major PPT

72.3

0.5

Minor 5ss

47.9

-0.2

2.9

66.7

44.7

Minor BPS

57.1

0.22

1.6

65.2

41.3

Associated Gene:

Gene:

EXT2

Ensembl Gene ID:

ENSAPLG00000007139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007439

12566967 - 12634034

67068

ENSAPLT00000001952

12566967 - 12634034

67068