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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12574333_12581577_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12574333 - 12581577

Intron Length:

7245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

GTTAGCACAATG

Flanking Amino Acid:

TSDELQFGYEVWREFPDRLV

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

0.65

1.1

77.4

37.3

Major PPT

87.2

0.84

0.7

85.4

29.3

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

41.9

-0.7

2.2

50.39

43.5

Associated Gene:

Gene:

EXT2

Ensembl Gene ID:

ENSAPLG00000007139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007439

12566967 - 12634034

67068

ENSAPLT00000001952

12566967 - 12634034

67068