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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12581745_12593528_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12581745 - 12593528

Intron Length:

11784

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

TATTCTGCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTCTTCTAATA

Flanking Amino Acid:

WNNQNKNPPEDSLWPKIRVP

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

78.1

36.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

74.6

0.55

0.9

66.7

40.3

Minor 5ss

34.6

-1.8

3.2

49.1

46.6

Minor BPS

59.1

0.28

1.6

72.85

32.8

Associated Gene:

Gene:

EXT2

Ensembl Gene ID:

ENSAPLG00000007139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007439

12566967 - 12634034

67068

ENSAPLT00000001952

12566967 - 12634034

67068