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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12603010_12621301_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12603010 - 12621301

Intron Length:

18292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TTCTCTTTACAG

Flanking Amino Acid:

QRQIEEMQRQARWFWEAYFR

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

0.81

0.8

79.9

32.1

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

56.8

0.07

1.8

63.96

44.2

Associated Gene:

Gene:

EXT2

Ensembl Gene ID:

ENSAPLG00000007139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007439

12566967 - 12634034

67068