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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12622331_12625687_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12622331 - 12625687

Intron Length:

3357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CATTTGTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTCTTTATTT

Flanking Amino Acid:

QIFDYPQVLQEATFCVVLRG

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

72.6

0.51

1.1

68.1

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

71.8

0.76

1.5

85.98

34.4

Associated Gene:

Gene:

EXT2

Ensembl Gene ID:

ENSAPLG00000007139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007439

12566967 - 12634034

67068

ENSAPLT00000001952

12566967 - 12634034

67068