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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12625884_12629157_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12625884 - 12629157

Intron Length:

3274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAAGCAA

5'SS Class:

major

3'SS Sequence:

CTGTGTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

TGCCAAGTAACC

Flanking Amino Acid:

GEVDLPERGPGPRRYFILSS

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

59.1

41.5

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

82.9

0.74

0.9

80.3

37.3

Minor 5ss

-2.4

3.3

29.5

43.4

Minor BPS

42.3

-0.6

2.3

55.02

42.4

Associated Gene:

Gene:

EXT2

Ensembl Gene ID:

ENSAPLG00000007139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007439

12566967 - 12634034

67068

ENSAPLT00000001952

12566967 - 12634034

67068