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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12629275_12633221_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12629275 - 12633221

Intron Length:

3947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

CTTTCCTGTCTT

Flanking Amino Acid:

YNTALDVPRDRALLAGGGFS

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

27.8

Major BPS

70.2

0.5

1.1

77.2

Major PPT

86.1

0.81

0.8

84.1

30.8

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

40.6

-0.6

3.6

72.35

44.7

Associated Gene:

Gene:

EXT2

Ensembl Gene ID:

ENSAPLG00000007139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007439

12566967 - 12634034

67068

ENSAPLT00000001952

12566967 - 12634034

67068