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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12633312_12633472_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12633312 - 12633472

Intron Length:

161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTACA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

ACCTCTCTAATT

Flanking Amino Acid:

ETAQALAQLSRWDRGTNHLL

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

80.9

33.4

Major BPS

76.9

0.67

66.3

40.4

Major PPT

82.3

0.73

0.8

81.3

30.8

Minor 5ss

34.9

-1.7

2.8

43.6

43.5

Minor BPS

57.4

0.31

1.7

70.34

41.4

Associated Gene:

Gene:

EXT2

Ensembl Gene ID:

ENSAPLG00000007139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007439

12566967 - 12634034

67068

ENSAPLT00000001952

12566967 - 12634034

67068