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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12645436_12646559_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12645436 - 12646559

Intron Length:

1124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGGGTAAC

5'SS Class:

major

3'SS Sequence:

CTTTCTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAC

U12 Branch Point Sequence:

TTATCACTAACC

Flanking Amino Acid:

KAPAPLKAENVIVLNGCGSL

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

70.4

35.5

Major BPS

78.3

0.7

32.1

Major PPT

84.1

0.77

0.7

77.5

31.3

Minor 5ss

31.6

-2.1

40.2

39.3

Minor BPS

62.1

0.36

1.9

77.88

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046809

12638423 - 12654080

15658

ENSAPLT00000043489

12638423 - 12654080

15658

ENSAPLT00000020998

12638423 - 12679045

40623

ENSAPLT00000007711

12638423 - 12655417

16995