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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12647252_12649119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12647252 - 12649119

Intron Length:

1868

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTGCTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTACTTTTAATG

Flanking Amino Acid:

DLMSKRLKEQLTQTDMNLME

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.6

0.55

0.9

68.2

37.6

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

58.7

0.14

1.3

57.88

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007711

12638423 - 12655417

16995

ENSAPLT00000043489

12638423 - 12654080

15658

ENSAPLT00000020998

12638423 - 12679045

40623