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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12649132_12650002_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12649132 - 12650002

Intron Length:

871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTCGGCCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TACCCCACCACT

Flanking Amino Acid:

KLCFDLMSKRLKEQLTQTDM

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.4

33.4

Major BPS

61.3

0.28

52.7

34.2

Major PPT

72.1

0.5

0.9

61.3

40.1

Minor 5ss

42.4

-0.8

2.8

51.5

44.9

Minor BPS

44.1

-0.3

2.2

64.21

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020998

12638423 - 12679045

40623

ENSAPLT00000007711

12638423 - 12655417

16995

ENSAPLT00000043489

12638423 - 12654080

15658