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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12662054_12662177_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12662054 - 12662177

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

GCTTTTTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

ATTGGCTCACCT

Flanking Amino Acid:

MKAHHLRSTWAWS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

76.6

33.9

Major BPS

71.5

0.53

1.1

43.2

Major PPT

80.5

0.69

0.8

72.9

37.4

Minor 5ss

-1.4

2.8

52.2

44.4

Minor BPS

46.2

-0.2

2.3

70.25

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020998

12638423 - 12679045

40623