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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12662211_12678327_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12662211 - 12678327

Intron Length:

16117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATTTTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.5

41.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.3

0.77

0.9

81.1

35.2

Minor 5ss

-1.4

47.2

42.5

Minor BPS

77.6

0.86

1.1

83.48

30.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020998

12638423 - 12679045

40623