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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12694409_12694673_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12694409 - 12694673

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTAAC

5'SS Class:

major

3'SS Sequence:

CTGCTTGGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CCGTGCTGAGCC

Flanking Amino Acid:

VKHEPESLRIRGGQERGSAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

74.4

35.9

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

59.9

0.22

1.2

56.8

43.3

Minor 5ss

-1.7

2.9

45.5

42.6

Minor BPS

43.9

-0.4

2.1

50.56

46.2

Associated Gene:

Gene:

C11orf96

Ensembl Gene ID:

ENSAPLG00000026568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044517

12666838 - 12695516

28679

ENSAPLT00000030198

12666838 - 12694957

28120