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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12716419_12717927_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12716419 - 12717927

Intron Length:

1509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTTCTGTATCT

Flanking Amino Acid:

ELSTGPSGVSRIHLIPGFID

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

83.9

0.84

73.9

41.3

Major PPT

81.3

0.71

0.7

81.1

24.1

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

60.5

0.41

2.2

87.39

38.7

Associated Gene:

Gene:

ALKBH3

Ensembl Gene ID:

ENSAPLG00000019115

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021224

12701879 - 12721250

19372