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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12723998_12724199_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12723998 - 12724199

Intron Length:

202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTTCCTTTGATT

Flanking Amino Acid:

RPTGACPMPSWAGSSQFYLR

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

74.1

36.5

Major BPS

73.8

0.59

0.9

26.8

Major PPT

80.1

0.68

0.8

77.8

35.6

Minor 5ss

34.7

-1.7

2.9

41.5

39.2

Minor BPS

0.9

1.1

88.36

29.9

Associated Gene:

Gene:

HSD17B12

Ensembl Gene ID:

ENSAPLG00000026765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027683

12722046 - 12785491

63446

ENSAPLT00000035386

12722046 - 12770728

48683

ENSAPLT00000031754

12723486 - 12771406

47921