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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12729339_12732999_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12729339 - 12732999

Intron Length:

3661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTCTTTTCATT

Flanking Amino Acid:

LHC*LFTPHPRLLWITSLEA

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.4

32.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.6

0.76

0.7

82.2

Minor 5ss

44.1

-0.6

2.9

58.3

46.6

Minor BPS

55.1

0.24

1.7

74.8

36.5

Associated Gene:

Gene:

HSD17B12

Ensembl Gene ID:

ENSAPLG00000026765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035386

12722046 - 12770728

48683

ENSAPLT00000031754

12723486 - 12771406

47921

ENSAPLT00000027683

12722046 - 12785491

63446