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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12733082_12737797_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12733082 - 12737797

Intron Length:

4716

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTGCCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

AATTATTTCATT

Flanking Amino Acid:

HDWCCPACWKDQKG*S*ISL

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

77.5

32.9

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

77.5

0.62

0.9

73.3

37.2

Minor 5ss

29.1

-2.4

2.8

34.7

41.7

Minor BPS

51.3

0.12

1.9

72.28

38.9

Associated Gene:

Gene:

HSD17B12

Ensembl Gene ID:

ENSAPLG00000026765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035386

12722046 - 12770728

48683

ENSAPLT00000031754

12723486 - 12771406

47921

ENSAPLT00000027683

12722046 - 12785491

63446