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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12749099_12753343_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12749099 - 12753343

Intron Length:

4245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTTGTATC

5'SS Class:

major

3'SS Sequence:

GCTTTCGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

ATTAGAATAAAA

Flanking Amino Acid:

DWKAWRSVF**TTWEFHIRI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

79.1

34.5

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

80.1

0.68

0.9

76.7

37.4

Minor 5ss

42.7

-0.8

2.5

54.7

42.5

Minor BPS

42.1

-0.6

2.2

58.58

Associated Gene:

Gene:

HSD17B12

Ensembl Gene ID:

ENSAPLG00000026765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035386

12722046 - 12770728

48683

ENSAPLT00000031754

12723486 - 12771406

47921

ENSAPLT00000027683

12722046 - 12785491

63446