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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12912508_12915175_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12912508 - 12915175

Intron Length:

2668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TCTTTCTTTATA

Flanking Amino Acid:

FTLANVYVAMEEFEKAMKWY

Intron Amino Acid Position:

1179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

36.6

Major BPS

78.2

0.7

77.9

32.1

Major PPT

88.1

0.86

0.6

24.2

Minor 5ss

-2.2

3.2

41.8

Minor BPS

66.2

0.5

1.6

74.21

37.7

Associated Gene:

Gene:

TTC17

Ensembl Gene ID:

ENSAPLG00000007273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007617

12912376 - 12966242

53867

ENSAPLT00000023351

12911388 - 12966242

54855