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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12919276_12919745_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12919276 - 12919745

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGCCAC

5'SS Class:

major

3'SS Sequence:

TCCTCTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTCCAT

U12 Branch Point Sequence:

TCCTCTTTCACA

Flanking Amino Acid:

HYTGESQLKEVLQNLGKDQY

Intron Amino Acid Position:

1063

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

41.2

Major BPS

59.5

0.24

1.5

72.5

43.5

Major PPT

83.3

0.75

0.7

78.6

Minor 5ss

44.3

-0.6

2.8

58.6

46.2

Minor BPS

62.8

0.4

1.8

70.26

42.8

Associated Gene:

Gene:

TTC17

Ensembl Gene ID:

ENSAPLG00000007273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023351

12911388 - 12966242

54855

ENSAPLT00000007617

12912376 - 12966242

53867