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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12923116_12923711_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12923116 - 12923711

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

GTCCTTTTGGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTAATGTTAACC

Flanking Amino Acid:

DCGDDDEAEWITFQVKRLKK

Intron Amino Acid Position:

914

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

78.8

38.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

70.9

0.47

68.7

37.2

Minor 5ss

43.4

-0.7

2.8

46.2

Minor BPS

57.3

0.21

2.1

71.58

39.5

Associated Gene:

Gene:

TTC17

Ensembl Gene ID:

ENSAPLG00000007273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023351

12911388 - 12966242

54855

ENSAPLT00000007617

12912376 - 12966242

53867