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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12924735_12938433_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12924735 - 12938433

Intron Length:

13699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

ATATCAATAAAT

Flanking Amino Acid:

LYNITSSACSGHCHEKNLDG

Intron Amino Acid Position:

774

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

72.7

38.8

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

86.2

0.81

0.7

84.1

23.9

Minor 5ss

40.2

-1.1

2.9

52.9

44.1

Minor BPS

52.2

0.15

75.67

39.7

Associated Gene:

Gene:

TTC17

Ensembl Gene ID:

ENSAPLG00000007273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023351

12911388 - 12966242

54855

ENSAPLT00000007617

12912376 - 12966242

53867