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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12938621_12940746_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12938621 - 12940746

Intron Length:

2126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

ACATACTTACAC

Flanking Amino Acid:

LQALAINASEPLTFLSLGNA

Intron Amino Acid Position:

712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

88.5

0.87

0.6

22.5

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

47.6

-0.2

1.9

56.03

41.8

Associated Gene:

Gene:

TTC17

Ensembl Gene ID:

ENSAPLG00000007273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023351

12911388 - 12966242

54855

ENSAPLT00000007617

12912376 - 12966242

53867