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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12940972_12943125_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12940972 - 12943125

Intron Length:

2154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTCAA

5'SS Class:

strong_major

3'SS Sequence:

GACTCTCCTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TATTCCCTGACT

Flanking Amino Acid:

GAFLNHAMKKPEDSLWLVLN

Intron Amino Acid Position:

621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

74.3

Major BPS

100

1.24

0.5

100

Major PPT

0.43

0.9

61.9

34.6

Minor 5ss

32.5

-2

40.8

45.4

Minor BPS

73.3

0.82

1.6

89.53

34.3

Associated Gene:

Gene:

TTC17

Ensembl Gene ID:

ENSAPLG00000007273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023351

12911388 - 12966242

54855