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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12943204_12943766_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12943204 - 12943766

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AGTCTTTTAAAA

Flanking Amino Acid:

FKMPDDHARQILHSRINNQT

Intron Amino Acid Position:

595

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.9

29.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.5

0.64

0.9

72.8

37.5

Minor 5ss

33.8

-1.8

3.5

47.5

42.5

Minor BPS

0.28

1.3

65.05

34.5

Associated Gene:

Gene:

TTC17

Ensembl Gene ID:

ENSAPLG00000007273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023351

12911388 - 12966242

54855

ENSAPLT00000007617

12912376 - 12966242

53867