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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12943942_12945058_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12943942 - 12945058

Intron Length:

1117

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTATTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

ATCTCTTTATTC

Flanking Amino Acid:

YFLPPENRGFRVQSILNTAR

Intron Amino Acid Position:

536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.7

1.17

0.7

98.4

4.81

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

80.1

0.68

0.8

73.7

35.9

Minor 5ss

28.3

-2.5

4.2

48.7

47.5

Minor BPS

61.8

0.35

1.6

38.4

Associated Gene:

Gene:

TTC17

Ensembl Gene ID:

ENSAPLG00000007273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023351

12911388 - 12966242

54855

ENSAPLT00000007617

12912376 - 12966242

53867