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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12947356_12947681_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12947356 - 12947681

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACAACTT

5'SS Class:

major

3'SS Sequence:

TTGTGCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTCATTTAAATT

Flanking Amino Acid:

ETQMAKEAQLGNHQICRLGN

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

41.8

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

75.4

0.57

0.9

69.7

36.7

Minor 5ss

36.2

-1.6

3.6

56.6

47.5

Minor BPS

0.2

1.7

71.2

40.9

Associated Gene:

Gene:

TTC17

Ensembl Gene ID:

ENSAPLG00000007273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023351

12911388 - 12966242

54855

ENSAPLT00000007617

12912376 - 12966242

53867