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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12949132_12949812_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12949132 - 12949812

Intron Length:

681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTACTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TTTCTCTTTACT

Flanking Amino Acid:

GHRIYDGLMKNSSSWVLYNM

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.8

31.7

Major BPS

0.6

65.6

41.1

Major PPT

82.5

0.73

0.8

77.5

29.7

Minor 5ss

39.9

-1.1

2.8

51.4

45.5

Minor BPS

72.2

0.78

1.6

89.51

34.3

Associated Gene:

Gene:

TTC17

Ensembl Gene ID:

ENSAPLG00000007273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023351

12911388 - 12966242

54855

ENSAPLT00000007617

12912376 - 12966242

53867