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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12949945_12950752_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12949945 - 12950752

Intron Length:

808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

ACTTTTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

CTATCTTCAACT

Flanking Amino Acid:

YSIHAFQHLRGVQERVNLSA

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

72.3

39.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

80.3

0.68

0.8

78.5

Minor 5ss

31.6

-2.1

3.1

31.9

42.5

Minor BPS

68.4

0.66

1.5

80.99

40.8

Associated Gene:

Gene:

TTC17

Ensembl Gene ID:

ENSAPLG00000007273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023351

12911388 - 12966242

54855

ENSAPLT00000007617

12912376 - 12966242

53867