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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12953272_12966065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12953272 - 12966065

Intron Length:

12794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

AATTGTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAGAA

U12 Branch Point Sequence:

CTTACCTGGACT

Flanking Amino Acid:

VTEDGKIQQQVDSPMNLRNP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

0.5

39.8

Major PPT

77.6

0.62

0.9

70.3

40.3

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

65.6

0.57

1.6

81.03

40.6

Associated Gene:

Gene:

TTC17

Ensembl Gene ID:

ENSAPLG00000007273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023351

12911388 - 12966242

54855

ENSAPLT00000007617

12912376 - 12966242

53867