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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12968989_12969740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12968989 - 12969740

Intron Length:

752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AAAGTTTTAATT

Flanking Amino Acid:

YSSNLGSFSYEQRGGFRGGR

Intron Amino Acid Position:

488

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

80.6

29.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.9

0.76

0.9

81.3

35.7

Minor 5ss

-1.1

2.8

49.9

46.4

Minor BPS

58.9

0.36

1.3

67.51

37.8

Associated Gene:

Gene:

API5

Ensembl Gene ID:

ENSAPLG00000008406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008742

12968909 - 12981192

12284