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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12972817_12973029_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12972817 - 12973029

Intron Length:

213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGTC

5'SS Class:

strong_major

3'SS Sequence:

TAAAACTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTTTAAAACT

Flanking Amino Acid:

NAEKLKDFKIRLQYFARGLQ

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

81.6

30.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

67.2

0.39

63.1

43.2

Minor 5ss

37.3

-1.4

3.3

52.6

44.6

Minor BPS

0.17

1.9

76.89

39.8

Associated Gene:

Gene:

API5

Ensembl Gene ID:

ENSAPLG00000008406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008742

12968909 - 12981192

12284