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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12973212_12973800_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12973212 - 12973800

Intron Length:

589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGACTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

TGTGCCTCACCT

Flanking Amino Acid:

NLKKLFDKLLEYMPLPPEEA

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.5

37.2

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

74.3

0.55

0.9

74.7

Minor 5ss

35.7

-1.6

3.2

45.3

43.7

Minor BPS

55.3

0.24

76.98

45.2

Associated Gene:

Gene:

API5

Ensembl Gene ID:

ENSAPLG00000008406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008742

12968909 - 12981192

12284