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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12975416_12976093_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12975416 - 12976093

Intron Length:

678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTACTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGATGTTTTACT

Flanking Amino Acid:

EEFILTESKKVLEDVTGEEF

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.11

0.7

88.7

23.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

63.7

0.31

1.1

68.7

40.9

Minor 5ss

37.2

-1.4

3.3

45.2

Minor BPS

51.9

0.14

2.1

73.34

43.3

Associated Gene:

Gene:

API5

Ensembl Gene ID:

ENSAPLG00000008406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008742

12968909 - 12981192

12284