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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12976326_12977625_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12976326 - 12977625

Intron Length:

1300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTCAGGTAG

5'SS Class:

weak_major

3'SS Sequence:

AGTCTTGCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTATCTTAAAAT

Flanking Amino Acid:

RVADILTQLLQKLLSNVLKA

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.9

0.12

1.3

51.6

42.1

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

60.5

0.24

55.4

39.6

Minor 5ss

33.7

-1.9

3.2

43.9

44.5

Minor BPS

64.2

0.52

1.7

81.97

39.4

Associated Gene:

Gene:

API5

Ensembl Gene ID:

ENSAPLG00000008406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008742

12968909 - 12981192

12284