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Intron Name: Anas_platyrhynchos_platyrhynchos_5_13063195_13064700_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13063195 - 13064700

Intron Length:

1506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGATGGAT

5'SS Class:

weak_major

3'SS Sequence:

CTTTGCTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AATTACTCAAAA

Flanking Amino Acid:

DPAVCLLSKMKRNYLILLTV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.1

55.6

37.3

Major BPS

71.2

0.53

70.3

31.9

Major PPT

84.1

0.77

0.8

81.1

30.9

Minor 5ss

26.8

-2.7

3.5

33.8

Minor BPS

53.1

0.09

1.8

66.47

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019264

13063139 - 13064966

1828