Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_13080895_13081664_F

Intron Information:

Intron Rank:

127248

Intron Class:

major

Intron Phase:

Intron Coordinates:

13080895 - 13081664

Intron Length:

770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCAG

5'SS Class:

major

3'SS Sequence:

ATCTTTCACAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

CATACATGAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

62.2

43.8

Major BPS

68.7

0.47

0.9

67.9

Major PPT

62.9

0.29

1.1

35.6

Minor 5ss

36.2

-1.6

3.2

46.2

49.1

Minor BPS

54.1

0.21

1.8

72.67

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033198

13079962 - 13081829

1868