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Intron Name: Anas_platyrhynchos_platyrhynchos_5_13192766_13195098_F

Intron Information:

Intron Rank:

143315

Intron Class:

major

Intron Phase:

Intron Coordinates:

13192766 - 13195098

Intron Length:

2333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTCTGTATC

5'SS Class:

major

3'SS Sequence:

TTTTGCTGTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

GCTAACTAAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.3

69.2

41.7

Major BPS

68.7

0.47

0.9

67.9

Major PPT

80.9

0.7

0.9

73.4

41.9

Minor 5ss

42.3

-0.9

2.6

55.6

41.7

Minor BPS

49.1

0.01

1.9

66.31

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046752

13190131 - 13195535

5405