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Intron Name: Anas_platyrhynchos_platyrhynchos_5_13260702_13262297_F

Intron Information:

Intron Rank:

126975

Intron Class:

major

Intron Phase:

Intron Coordinates:

13260702 - 13262297

Intron Length:

1596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

TACCTCTCTATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTGAT

U12 Branch Point Sequence:

TCTTTCTGTAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

68.7

39.1

Major BPS

73.5

0.58

1.2

63.4

44.3

Major PPT

74.9

0.56

0.8

69.2

31.1

Minor 5ss

40.8

-1

2.8

45.7

43.5

Minor BPS

48.8

-0

2.1

71.97

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018417

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021194

13259566 - 13262381

2816